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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015914074.1_cds_XP_016464102.1_57166
CDS Infomation

[gene=LOC107787096] [db_xref=GeneID:107787096] [protein=ATG8-interacting protein 1-like isoform X2] [protein_id=XP_016464102.1] [location=complement(join(37658..37762,39381..39796,39872..40211))] [gbkey=CDS]
Sequence

ATGGCTAGCAATGAGGAAGGGGAGGAAACTGCTCCTCGTGGAAATGAGTGGGAAGTTGTA
TCACTTACACAATCAGCATATGCTGCTGCCCCTGGTCCAAAGCAGGTTGACCCGAATGAT
GATGATAATAATAGTAGTGCAGAGTATGTAGCTGAGACTTCCCAGGCAATGTTTATGTCT
GGTCACTTTGTCTTTCCACCAAGCCAGCATGAGAATTTGCCGTTGGAACCCGATGTTAAT
GAGATCCGTAATGAACAGGGAGGTGAAGATGCTGCTCCAGAACTTGTTGCTGATGAAGGG
GGTAAATCAGATATTTATGAAGGAAGTACAAAAACTAAAAAATTTGAAGAAGATGCTGCC
CTGCAAGGCTTAAGTTTGGTAGACAAAGAGCAGAGTTTCCTTGGTACTGCTAACTATAGT
TCATGCCAGAGTGAAGAACCCATGGATCTCTCAGCAACAACAGAGGAAACCAATGTGCAT
GCAGAACCAGTTGAACTCTTTTACCAGGGCTTAGACTCAGGCATCTCAAATTTGCCAAAG
TCTAAAGATGAAGATGATGATGATACAGCTAACCTTCCTTGTCAAGCATGGTGGAAAAGA
GGGGCTGCTTCCCTTGTGGCCCATGCGAAAGACGCAAATGCATTCTGGTCTATTTTCATT
GCTGCTGCTGTTATGGGCCTTGTGATTATTGGGCAGACGTGGCAGCAAGAAAGGTGGCAG
GTGTTGCAAACGAAGTGGCAGGTTGTCCATGGGGAGAGGATTGGCAGGATGTTTGGTCCA
CTATCTCGACTGAAAGATGTGATTGTTGGGGGTGATCGCCGTGGTACCTTTATCAGAGGG
AGTGCACCAGCTCAACTTTAA

Peptide Sequence

PEP ID

XP_016464102.1
PEP Infomation

PREDICTED: ATG8-interacting protein 1-like isoform X2 [Nicotiana tabacum]
Sequence

MASNEEGEETAPRGNEWEVVSLTQSAYAAAPGPKQVDPNDDDNNSSAEYVAETSQAMFMS
GHFVFPPSQHENLPLEPDVNEIRNEQGGEDAAPELVADEGGKSDIYEGSTKTKKFEEDAA
LQGLSLVDKEQSFLGTANYSSCQSEEPMDLSATTEETNVHAEPVELFYQGLDSGISNLPK
SKDEDDDDTANLPCQAWWKRGAASLVAHAKDANAFWSIFIAAAVMGLVIIGQTWQQERWQ
VLQTKWQVVHGERIGRMFGPLSRLKDVIVGGDRRGTFIRGSAPAQL

Transcript Sequence

Gene sequence data has not been registered.